Molecular models databases.
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Molecular Models
Make your molecular diagrams come to life with 3D molecular modelingBy Nathan Eidem, Writer Molecular models allow you to visualize chemical structures. Textbooks only provide 2D visualizations of molecular structure; 3D molecular modeling can be accomplished using molecular modeling kits or digital molecular models. Kits are good for teaching and presentations, while computer-based molecular models offer advanced modeling capability. Molecular modeling software packages allow you to perform complex calculations and manipulate molecules in 3D virtual space. Using a molecular model, researchers are able to iteratively design medicinal drugs. 3D molecular modeling software will help scientists to develop drugs for treating a range of diseases including AIDS, cancer and arthritis.
Molecular modeling is a growing field, and more resources are available to consumers. Whether you are interested in molecular modeling kits or computer-based molecular models, the Internet provides several options from which to choose.
Use the following recommendations to find the molecular modeling tools you need:
1. Molecular modeling kits provide hands-on visualization tools.
2. Free software provides a way of creating basic molecular models.
3. Professional molecular modeling software offers advanced modeling functionality.
Use molecular modeling kits for hands-on modeling exercises
Molecular models provide a solid physical representation of atomic structure. Use these to create solid molecular structures. These models are excellent for teaching chemistry.
Try: Indigo Instruments has a variety of molecular modeling kits for sale. From carbon allotropes to molecular biology and crystal lattices, this dealer can help you with your modeling needs. Molecular Visions offers several modeling kits, including those for specialized molecular modeling. This company also offers parts for your models.
Download free 3D molecular modeling software
Multiple free molecular modeling software packages are available online. These packages provide you with the tools you need for creating basic molecular models.
Try: Planaria Software offers a free 3D molecular modeling software package, ArgusLab. Download this software package from the company's website. Accelrys' Discovery Studio Visualizer 2.0 provides commercial grade graphics visualization for free. Complete a brief survey to request your copy.
Purchase professional software for advanced molecular modeling
If you need a wider range of options in your molecular modeling software, consider purchasing a professional package. Several companies offer demos or trial periods that allow you to see the software in action.
Try: ChemSW provides a range of licensing options for its Molecular Modeling Pro software. This program is the result of 20 years of development. Download a demo to see if it is right for you. Hypercube's HyperChem is a sophisticated, yet easy-to-use 3D molecular modeling software package. Download a 10-day trial license to try it out.
- Many university chemistry departments have developed molecular modeling software. These packages offer a range of functionality, but are usually free. While many of these programs may be simple, they can help you to get started with digital molecular modeling.
Access Excellence Graphics Gallery
Provider of molecular modeling resources, including labeled diagrams with explanations representing the important processes of biotechnology.
http://www.accessexcellence.org/AB/GG/
Advanced Chemistry Development
Provider of interactive molecular modeling resources that allow structure drawing and analysis.
Provider of molecular modeling resources, including searchable databases, software, publications and seminars.
Provider of molecular modeling resources and a searchable database for three-dimensional rendered molecules.
http://www.chem.com/structures/
Chemicals with Pharmaceutical Activity
Provider of molecular modeling resources and a searchable database.
http://www.chem.ox.ac.uk/mom/chemical-database/
Provider of molecular modeling resources, mainly basic crystal lattices.
http://cst-www.nrl.navy.mil/lattice/
Network service for comparing protein structures in three-dimension.
Department of Crystal and Structural Chemistry
Provider of molecular modeling resources and software.
http://www.crystal.chem.uu.nl/distr/
FrontDoor to Protein Explorer 1.72 Beta
Provider of 3D structure visualization tools for proteins.
http://www.umass.edu/microbio/chime/explorer/
Provider of molecular structure prediction modeling resources.
http://www.bmm.icnet.uk/people/rob/CCP11BBS/
Searchable database of heterocompounds encountered in files from the Protein Data Bank (PDB).
http://alpha2.bmc.uu.se/hicup/
Molecular struture database for amino compounds rendered in three-dimension.
http://www.chemie.fu-berlin.de/chemistry/bio/amino-acids.html
Provider of molecular modeling resources for thermotropic liquid crystals.
http://liqcryst.chemie.uni-hamburg.de/
Provider of 3D structure illustrations of dendrimers, proteins, nanotechnology, ceramics and quantum models also provides related simulations.
http://www.wag.caltech.edu/gallery/art_gallery.html
Molecular Structure Calculations
Provider of molecular modeling resources and quantum values.
http://www.colby.edu/chemistry/webmo/mointro.html
Provider of molecular visualization tools for academia and research.
Provider of molecular structures and related resources.
http://www.bristol.ac.uk/Depts/Chemistry/MOTM/motm.htm
Provider of molecular modeling resources and a searchable database for three-dimensional and two-dimensional structures.
http://www.cmbi.kun.nl/wetche/organic/
Searchable database of atoms, molecules, atomic orbitals and visualization tools.
Provider of molecular modeling resources and searchable database of proteins structures.
http://laguerre.psc.edu/general/software/packages/nrl_3d/nrl_3d.html
Provider of molecular modeling resources in real time.
http://kinemage.biochem.duke.edu/website/kinhome.htm
Online Macromolecular Museum (OMM)
Provider of molecular modeling resources and a searchable database.
http://www.clunet.edu/BioDev/omm/gallery.htm
Searchable database of 3-D protein structures. Also provides comparison tools.
Provider of molecular modeling resources and scientific visualization models.
http://www.knowledgebydesign.com/tlmc/tlmc_cg.html
Virtual Museum of Minerals and Molecules
Provider of 3D molecualr visualization tools.
http://www.soils.wisc.edu/virtual_museum/index.html
Provider of molecular modeling resources for displaying, animating and analyzing large biomolecular systems using three-dimensional graphics.
http://www.ks.uiuc.edu/Research/vmd/
Manufacturer of perfume ingredients and active aromatics, including methyl and ethyl maltol and dihydroxy methyl malonic acid. Also provides two-dimensional molecular illustration of compounds.
Wellesley University, College of Chemistry
Provider of online molecular 3D models of various chemical compounds.
http://www.wellesley.edu/Chemistry/Flick/molecules/newlist.html
World Index of Molecular Visualization Resources
Provider of molecular modeling resources and searchable databases.
http://molvis.sdsc.edu/visres/
Developer of spectral data processor software and a series of digital spectral database systems including molecular structure 3D modeling.
Zonyl Fluorosurfactants Chemical Structure
Provider of fluorosurfactant chemical structures manufactured by Dupont.
http://www.dupont.com/zonyl/chemical.html
Tips & Advice to help you make your decision on Molecular Models
Molecular models are the way that the scientific community can explain the way that molecules exist and move without actually being able to take a picture of them. This can helpful to businesses that sell products that affect things on a molecular level. There are websites for educational resources that sell them at a good price.
These can really be a learning tool for businesses to bridge the gap with the customers to help them understand what their product is doing. Business.com can provide more information about molecular models and how businesses can utilize them. These are a low cost way to get complex information across to potential customers.
Businesses that sell ... more
Molecular models are the way that the scientific community can explain the way that molecules exist and move without actually being able to take a picture of them. This can helpful to businesses that sell products that affect things on a molecular level. There are websites for educational resources that sell them at a good price.
These can really be a learning tool for businesses to bridge the gap with the customers to help them understand what their product is doing. Business.com can provide more information about molecular models and how businesses can utilize them. These are a low cost way to get complex information across to potential customers.
Businesses that sell foods or chemicals can buy a molecular modeling set that emulates the chemicals in the products that they sell. This can also help businesses to develop these products and understand
them more deeply themselves. They are fairly inexpensive, and many students may even already have them. There are a variety of different types of molecular models that can be purchased, such as ones that have moving parts and ones that are fixed.
Molecular models are a great way to continue the learning process for both the customers and the businesses. They are a low cost to pay to make this information more available.